B4 JZ575510 Amolops loloensis 7E-24 5 Actin cytoskeleton organization, sequestering of actin

B4 JZ575510 Amolops loloensis 7E-24 5 Actin cytoskeleton organization, sequestering of actin monomers Protein polymerization, microtubule-based process Oxygen transport cellular iron ion homeostasis, iron ion Transport Oxygen transport Iron ion transport, cellular iron ion Homeostasis Proteolysis Proteolysis Regulation of cellular transcription Cellular transcription afp arhgap29 scg2 JZ575392 JZ575466 JZ575499 Mus musculus Danio rerio Xenopus laevis 4E-27 7E-09 8E-09 13 2 1 SMAD protein signal transduction, transport Signal transduction MAPKKK cascade, angiogenesis Gene symbol P. annectens accession no. Homolog species Evalue No of clones Biological processestubulin, beta 2C Iron metabolism and transport alpha globin chain ferritin heavy chain hemoglobin alpha 3 subunit transferrin Protein degradation carboxypeptidase B2 hyaluronan binding protein 2 Transcription basic leucine zipper and W2 domains 1 nascent polypeptide-associated complex alpha subunit isoform b Oxidation reduction NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial precursor putative urate oxidase Transport adaptor-related protein complex 4, mu 1 subunit retinol binding protein serum albumin solute carrier family 41, member 2 Others alanine:glyoxylate aminotransferase-like cyclophilin A fetuin B fukutin related protein isoformtubb2cJZXenopus (SP600125MedChemExpress SP600125 Silurana) tropicalis Rattus norvegicus Bufo gargarizans Xenopus (Silurana) tropicalis Salmo marmoratus3E-hba fth hba3 tfJZ575393 JZ575417 JZ575432 JZ4E-15 3E-84 3E-07 2E-15 1 1cpb2 habp2 bzw1 nacaJZ575401 JZ575436 JZ575400 JZXenopus (Silurana) tropicalis Danio rerio Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalis Esox lucius5E-26 3E-16 7E-73 2E-5 1 2ndufbJZ1E-Electron transport chainuoxJZProtopterus annectens Danio rerio Cyprinus carpio Ornithorhynchus anatinus Xenopus (Silurana) tropicalis Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalisPurine base metabolic process, oxidation reduction Intracellular protein transport Retinoic acid metabolic process, transport Transport Ion transportap4m1 rbp alb slc41aJZ575388 JZ575465 JZ575602 JZ4E-72 3E-43 6E-50 4E-5 1 1agxt ppia fetub fkrpJZ575389 JZ575406 JZ575420 JZ7E-48 9E-54 6E-23 3E-3 2 15Unclassified Protein folding Unclassified Glycoprotein biosynthetic process (Continued)PLOS ONE | DOI:10.1371/journal.pone.0121224 March 30,18 /Differential Gene Expression in the Liver of the African LungfishTable 5. (Continued) Group and Gene heat shock protein 20 isopentenyl-diphosphate delta isomerase 1 lem domain containing 3 macrophage Vercirnon biological activity migration inhibitory factor myotubularin ndrg2 protein nk2 transcription factor related 2a plasminogen activator inhibitor 1 RNAbinding protein protein tyrosine Basmisanil side effects phosphatase, receptor type, U ribosomal protein L26 fragment 2 serine protease inhibitor serine/threonine kinase receptor associated protein swi/snk related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 tetratricopeptide repeat domain 11 vitelline membrane outer layer protein 1 homolog precursor putative doi:10.1371/journal.pone.0121224.t005 lemd3 mif mtm1 ndrg2 nkx2.2a serpine1 ptpru rpl26 a1at strap smarca4 JZ575444 JZ575447 JZ575452 get ABT-737 JZ575456 JZ575457 JZ575461 JZ575463 JZ575477 JZ575500 JZ575501 JZ575508 Danio rerio Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Danio rerio Salmo salar Xenopus (Silurana) tropicalis Pelodiscus sinensis Cyprinus carpio Danio rerio Danio rerio 1E-11 4E-11 2E-14 1E-.B4 JZ575510 Amolops loloensis 7E-24 5 Actin cytoskeleton organization, sequestering of actin monomers Protein polymerization, microtubule-based process Oxygen transport cellular iron ion homeostasis, iron ion Transport Oxygen transport Iron ion transport, cellular iron ion Homeostasis Proteolysis Proteolysis Regulation of cellular transcription Cellular transcription afp arhgap29 scg2 JZ575392 JZ575466 JZ575499 Mus musculus Danio rerio Xenopus laevis 4E-27 7E-09 8E-09 13 2 1 SMAD protein signal transduction, transport Signal transduction MAPKKK cascade, angiogenesis Gene symbol P. annectens accession no. Homolog species Evalue No of clones Biological processestubulin, beta 2C Iron metabolism and transport alpha globin chain ferritin heavy chain hemoglobin alpha 3 subunit transferrin Protein degradation carboxypeptidase B2 hyaluronan binding protein 2 Transcription basic leucine zipper and W2 domains 1 nascent polypeptide-associated complex alpha subunit isoform b Oxidation reduction NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial precursor putative urate oxidase Transport adaptor-related protein complex 4, mu 1 subunit retinol binding protein serum albumin solute carrier family 41, member 2 Others alanine:glyoxylate aminotransferase-like cyclophilin A fetuin B fukutin related protein isoformtubb2cJZXenopus (Silurana) tropicalis Rattus norvegicus Bufo gargarizans Xenopus (Silurana) tropicalis Salmo marmoratus3E-hba fth hba3 tfJZ575393 JZ575417 JZ575432 JZ4E-15 3E-84 3E-07 2E-15 1 1cpb2 habp2 bzw1 nacaJZ575401 JZ575436 JZ575400 JZXenopus (Silurana) tropicalis Danio rerio Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalis Esox lucius5E-26 3E-16 7E-73 2E-5 1 2ndufbJZ1E-Electron transport chainuoxJZProtopterus annectens Danio rerio Cyprinus carpio Ornithorhynchus anatinus Xenopus (Silurana) tropicalis Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalisPurine base metabolic process, oxidation reduction Intracellular protein transport Retinoic acid metabolic process, transport Transport Ion transportap4m1 rbp alb slc41aJZ575388 JZ575465 JZ575602 JZ4E-72 3E-43 6E-50 4E-5 1 1agxt ppia fetub fkrpJZ575389 JZ575406 JZ575420 JZ7E-48 9E-54 6E-23 3E-3 2 15Unclassified Protein folding Unclassified Glycoprotein biosynthetic process (Continued)PLOS ONE | DOI:10.1371/journal.pone.0121224 March 30,18 /Differential Gene Expression in the Liver of the African LungfishTable 5. (Continued) Group and Gene heat shock protein 20 isopentenyl-diphosphate delta isomerase 1 lem domain containing 3 macrophage migration inhibitory factor myotubularin ndrg2 protein nk2 transcription factor related 2a plasminogen activator inhibitor 1 RNAbinding protein protein tyrosine phosphatase, receptor type, U ribosomal protein L26 fragment 2 serine protease inhibitor serine/threonine kinase receptor associated protein swi/snk related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 tetratricopeptide repeat domain 11 vitelline membrane outer layer protein 1 homolog precursor putative doi:10.1371/journal.pone.0121224.t005 lemd3 mif mtm1 ndrg2 nkx2.2a serpine1 ptpru rpl26 a1at strap smarca4 JZ575444 JZ575447 JZ575452 JZ575456 JZ575457 JZ575461 JZ575463 JZ575477 JZ575500 JZ575501 JZ575508 Danio rerio Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Danio rerio Salmo salar Xenopus (Silurana) tropicalis Pelodiscus sinensis Cyprinus carpio Danio rerio Danio rerio 1E-11 4E-11 2E-14 1E-.B4 JZ575510 Amolops loloensis 7E-24 5 Actin cytoskeleton organization, sequestering of actin monomers Protein polymerization, microtubule-based process Oxygen transport cellular iron ion homeostasis, iron ion Transport Oxygen transport Iron ion transport, cellular iron ion Homeostasis Proteolysis Proteolysis Regulation of cellular transcription Cellular transcription afp arhgap29 scg2 JZ575392 JZ575466 JZ575499 Mus musculus Danio rerio Xenopus laevis 4E-27 7E-09 8E-09 13 2 1 SMAD protein signal transduction, transport Signal transduction MAPKKK cascade, angiogenesis Gene symbol P. annectens accession no. Homolog species Evalue No of clones Biological processestubulin, beta 2C Iron metabolism and transport alpha globin chain ferritin heavy chain hemoglobin alpha 3 subunit transferrin Protein degradation carboxypeptidase B2 hyaluronan binding protein 2 Transcription basic leucine zipper and W2 domains 1 nascent polypeptide-associated complex alpha subunit isoform b Oxidation reduction NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial precursor putative urate oxidase Transport adaptor-related protein complex 4, mu 1 subunit retinol binding protein serum albumin solute carrier family 41, member 2 Others alanine:glyoxylate aminotransferase-like cyclophilin A fetuin B fukutin related protein isoformtubb2cJZXenopus (Silurana) tropicalis Rattus norvegicus Bufo gargarizans Xenopus (Silurana) tropicalis Salmo marmoratus3E-hba fth hba3 tfJZ575393 JZ575417 JZ575432 JZ4E-15 3E-84 3E-07 2E-15 1 1cpb2 habp2 bzw1 nacaJZ575401 JZ575436 JZ575400 JZXenopus (Silurana) tropicalis Danio rerio Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalis Esox lucius5E-26 3E-16 7E-73 2E-5 1 2ndufbJZ1E-Electron transport chainuoxJZProtopterus annectens Danio rerio Cyprinus carpio Ornithorhynchus anatinus Xenopus (Silurana) tropicalis Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalisPurine base metabolic process, oxidation reduction Intracellular protein transport Retinoic acid metabolic process, transport Transport Ion transportap4m1 rbp alb slc41aJZ575388 JZ575465 JZ575602 JZ4E-72 3E-43 6E-50 4E-5 1 1agxt ppia fetub fkrpJZ575389 JZ575406 JZ575420 JZ7E-48 9E-54 6E-23 3E-3 2 15Unclassified Protein folding Unclassified Glycoprotein biosynthetic process (Continued)PLOS ONE | DOI:10.1371/journal.pone.0121224 March 30,18 /Differential Gene Expression in the Liver of the African LungfishTable 5. (Continued) Group and Gene heat shock protein 20 isopentenyl-diphosphate delta isomerase 1 lem domain containing 3 macrophage migration inhibitory factor myotubularin ndrg2 protein nk2 transcription factor related 2a plasminogen activator inhibitor 1 RNAbinding protein protein tyrosine phosphatase, receptor type, U ribosomal protein L26 fragment 2 serine protease inhibitor serine/threonine kinase receptor associated protein swi/snk related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 tetratricopeptide repeat domain 11 vitelline membrane outer layer protein 1 homolog precursor putative doi:10.1371/journal.pone.0121224.t005 lemd3 mif mtm1 ndrg2 nkx2.2a serpine1 ptpru rpl26 a1at strap smarca4 JZ575444 JZ575447 JZ575452 JZ575456 JZ575457 JZ575461 JZ575463 JZ575477 JZ575500 JZ575501 JZ575508 Danio rerio Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Danio rerio Salmo salar Xenopus (Silurana) tropicalis Pelodiscus sinensis Cyprinus carpio Danio rerio Danio rerio 1E-11 4E-11 2E-14 1E-.B4 JZ575510 Amolops loloensis 7E-24 5 Actin cytoskeleton organization, sequestering of actin monomers Protein polymerization, microtubule-based process Oxygen transport cellular iron ion homeostasis, iron ion Transport Oxygen transport Iron ion transport, cellular iron ion Homeostasis Proteolysis Proteolysis Regulation of cellular transcription Cellular transcription afp arhgap29 scg2 JZ575392 JZ575466 JZ575499 Mus musculus Danio rerio Xenopus laevis 4E-27 7E-09 8E-09 13 2 1 SMAD protein signal transduction, transport Signal transduction MAPKKK cascade, angiogenesis Gene symbol P. annectens accession no. Homolog species Evalue No of clones Biological processestubulin, beta 2C Iron metabolism and transport alpha globin chain ferritin heavy chain hemoglobin alpha 3 subunit transferrin Protein degradation carboxypeptidase B2 hyaluronan binding protein 2 Transcription basic leucine zipper and W2 domains 1 nascent polypeptide-associated complex alpha subunit isoform b Oxidation reduction NADH dehydrogenase 1 beta subcomplex subunit 8, mitochondrial precursor putative urate oxidase Transport adaptor-related protein complex 4, mu 1 subunit retinol binding protein serum albumin solute carrier family 41, member 2 Others alanine:glyoxylate aminotransferase-like cyclophilin A fetuin B fukutin related protein isoformtubb2cJZXenopus (Silurana) tropicalis Rattus norvegicus Bufo gargarizans Xenopus (Silurana) tropicalis Salmo marmoratus3E-hba fth hba3 tfJZ575393 JZ575417 JZ575432 JZ4E-15 3E-84 3E-07 2E-15 1 1cpb2 habp2 bzw1 nacaJZ575401 JZ575436 JZ575400 JZXenopus (Silurana) tropicalis Danio rerio Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalis Esox lucius5E-26 3E-16 7E-73 2E-5 1 2ndufbJZ1E-Electron transport chainuoxJZProtopterus annectens Danio rerio Cyprinus carpio Ornithorhynchus anatinus Xenopus (Silurana) tropicalis Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Xenopus (Silurana) tropicalisPurine base metabolic process, oxidation reduction Intracellular protein transport Retinoic acid metabolic process, transport Transport Ion transportap4m1 rbp alb slc41aJZ575388 JZ575465 JZ575602 JZ4E-72 3E-43 6E-50 4E-5 1 1agxt ppia fetub fkrpJZ575389 JZ575406 JZ575420 JZ7E-48 9E-54 6E-23 3E-3 2 15Unclassified Protein folding Unclassified Glycoprotein biosynthetic process (Continued)PLOS ONE | DOI:10.1371/journal.pone.0121224 March 30,18 /Differential Gene Expression in the Liver of the African LungfishTable 5. (Continued) Group and Gene heat shock protein 20 isopentenyl-diphosphate delta isomerase 1 lem domain containing 3 macrophage migration inhibitory factor myotubularin ndrg2 protein nk2 transcription factor related 2a plasminogen activator inhibitor 1 RNAbinding protein protein tyrosine phosphatase, receptor type, U ribosomal protein L26 fragment 2 serine protease inhibitor serine/threonine kinase receptor associated protein swi/snk related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 tetratricopeptide repeat domain 11 vitelline membrane outer layer protein 1 homolog precursor putative doi:10.1371/journal.pone.0121224.t005 lemd3 mif mtm1 ndrg2 nkx2.2a serpine1 ptpru rpl26 a1at strap smarca4 JZ575444 JZ575447 JZ575452 JZ575456 JZ575457 JZ575461 JZ575463 JZ575477 JZ575500 JZ575501 JZ575508 Danio rerio Xenopus laevis Xenopus laevis Xenopus (Silurana) tropicalis Danio rerio Salmo salar Xenopus (Silurana) tropicalis Pelodiscus sinensis Cyprinus carpio Danio rerio Danio rerio 1E-11 4E-11 2E-14 1E-.